BIOSTAT M280

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Course Schedule

BIOSTAT M280 tentative schedule and handouts (expect frequent updates)

Readings:

Week Monday Wednesday Homework
1 4/3 introduction and course logistics. [Slides: notebook, html] 4/5 computer languages, Julia intro. [Slides: notebook, html] HW1: ipynb, html, longley.txt
2 4/10 tools for reproducible research [Slides: notebook, html] 4/12 computer storage and arithmetic [Slides: notebook, html]  
3 4/17 algo. intro. [Slides: notebook, html] 4/19 BLAS [Slides: notebook, html] HW2: ipynb, html
4 4/24 triangular systems [Slides: notebook, html], GE/LU [Slides: notebook, html] 4/26 Cholesky [Slides: notebook, html]  
5 5/1 QR (GS, Householder, Givens) [Slides: notebook, html], Sweep operator [Slides: notebook, html] 5/3 summary of linear regression [Slides: notebook, html] HW3: ipynb, html, ucla.zip
6 5/8 condition number [Slides: notebook, html], iterative methods intro [Slides: notebook, html], easy linear systems [Slides: notebook, html] 5/10 eigen-decomposition, SVD [Slides: notebook, html]  
7 5/15 optimization intro. [Slides: notebook, html] 5/17 Newton-Raphson, Fisher scoring, GLM, nonlinear regression (Gauss-Newton) [Slides: notebook, html] HW4: ipynb, html, optdigits.tra, optdigits.tes
8 5/22 EM algorithm [Slides: notebook, html] 5/24 MM algorithm [Slides: notebook, html]  
9 5/29 Memorial Day, no class 5/31 quasi-Newton [Slides: notebook, html] HW5: ipynb, html
10 6/5 CG and PCG [Slides: notebook, html] 6/7 convex optimization [Slides: notebook, html], concluding remarks [Slides: notebook, html]